Added in the new files and swapped the theme to my modified version of bootstrap386

docs/Troubleshooting/connections.md

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+# Connections to servers
+
+Usually connections to servers are a sign that all is working, occasionally though some nefarious parties decide that they really like the server and want to hog all the connections to themselves.
+
+A command you can use to see the connections on a server is
+
+`netstat -anp | grep 'tcp\|udp' | awk '{print $5}' | cut -d ':' -f 1 | sort | uniq -c | nort -n`
+
+In these situations we will usually see a high connection count for certain services, the most common ones are (In order of how common they are)
+
+* HTTP (Web Service)
+* SMTP (Outgoing Email Service)
+* IMAP (Incoming Email Service)
+* POP3 (Incoming Email Service)
+* FTP (File Transport Service)
+
+##HTTP
+
+Finding IP addresses connecting to HTTP is quite easy, all you should need to do is tail access logs to find the IP addresses
+
+You can use a command like `tail -f /home/*/access-logs/* | awk '{print $1}'` to get a live update on connections via HTTP/HTTPS on the server. [For more information on the commands used click here](/Commands/commands.md) *__Note: This will only check sites in /home__*
+
+##SMTP